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学科主题: 生物科学::普通生物学
题名: Pedobacter psychrotolerans sp nov., isolated from soil
作者: Manandhar, P (Manandhar, Pooja)1, 2; Zhang, GX (Zhang, Gengxin)1; Lama, A (Lama, Arun)3; Hu, YL (Hu, Yilun)1, 2; Gao, F (Gao, Feng)1, 4
通讯作者: Zhang, GX
关键词: GENUS PEDOBACTER ; EMENDED DESCRIPTION ; RENATURATION RATES ; DNA HYBRIDIZATION ; COMB. NOV ; WATER ; RECLASSIFICATION ; CLASSIFICATION ; HEPARINUS ; BACTERIA
刊名: INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
发表日期: 2016
DOI: 10.1099/ijsem.0.001391
卷: 66, 期:0, 页:4560-4566
收录类别: SCI
合作性质: 国内
文章类型: Article
部门归属: 生态
英文摘要: A Gram-stain-negative, non-motile, light-pink-pigmented, aerobic, rod-shaped bacterium, designated V5RD(T), was isolated from soil of Damxung county in the Qinghai-Tibetan Plateau. Strain V5RD(T) grew luxuriously at 10 degrees C, at pH 9.0 and in the presence of 1 % NaCl (w/v). Phylogenetic analysis of 16S rRNA gene sequences placed strain V5RD(T) in the genus Pedobacter and found that it was most closely related to Pedobacter alluvionis DSM 19624(T) (97.3 %), Pedobacter ginsenosidimutans JCM 16721(T) (96.84 %), Pedobacter agri DSM 19486(T) (96.28 %), Pedobacter roseus JCM 13399(T) (96.22 %), Pedobacter sandarakinus KCTC 12559(T) (95.92 %) and Pedobacter borealis DSM 19626(T) (95.85 %). The G+C content of the genomic DNA of the type strain V5RD(T) was 37.40 mol%. DNA-DNA relatedness for the type strain V5RD(T) with respect to its closest phylogenetic relative, Pedobacter. alluvionis DSM 19624(T), was 62.5 +/- 1.7 %. The polar lipid profile of the strain consisted of phosphatidylethanolamine, one unidentified aminolipid, one unidentified glycolipid and two unidentified polar lipids. Menaquinone MK-7 was the predominant respiratory quinone, and summed feature 3 (comprising C-16 : 1 omega 7c and/or C-16 :1 omega 6c), iso-C-15 : 0 and iso-C-17 : 0 3-OH were the major fatty acids. With respect to phenotypic characteristics, biochemical properties and phylogenetic inference, strain V5RD(T) represents a novel species of the genus Pedobacter, for which the name Pedobacter psychrotolerans sp. nov is proposed. The type strain is V5RD(T) (=CGMCC 1.15644(T)=DSM 103236(T)).
语种: 英语
WOS记录号: WOS:000390686600039
Citation statistics:
内容类型: 期刊论文
URI标识: http://ir.itpcas.ac.cn/handle/131C11/7502
Appears in Collections:图书馆_期刊论文

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作者单位: 1.Chinese Acad Sci, Inst Tibetan Plateau Res, Key Lab Alpine Ecol & Biodivers, Beijing, Peoples R China
2.Univ Chinese Acad Sci, Beijing, Peoples R China
3.Tsinghua Univ, Sch Environm, Beijing, Peoples R China
4.Hebei Univ Engn, Handan, Peoples R China

Recommended Citation:
Manandhar, P ,Zhang, GX ,Lama, A ,et al. Pedobacter psychrotolerans sp nov., isolated from soil[J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,2016,66(0):4560-4566.
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