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Genome-wide survey indicates diverse physiological roles of the turnip (Brassica rapa var. rapa) calcium-dependent protein kinase genes
Wang, QL (Wang, Qiuli)1,2,3,4; Yin, X (Yin, Xin)1,2,3,5; Chen, Q (Chen, Qian)1,2,3; Xiang, N (Xiang, Nan)1,2,3; Sun, XD (Sun, Xudong)1,2,3; Yang, YQ (Yang, Yunqiang)1,2,3; Yang, YP (Yang, Yongping)1,2,3; Yang, YQ; Yang, YP
Source PublicationSCIENTIFIC REPORTS
2017
Volume7Issue:0Pages:15803
DOI10.1038/s41598-017-16102-0
AbstractCalcium-dependent protein kinases (CDPKs) as crucial sensors of calcium concentration changes play important roles in responding to abiotic and biotic stresses. In this study, 55 BrrCDPK genes, which were phylogenetically clustered into four subfamilies, were identified. Chromosome locations indicated that the CDPK family in turnip expanded by segmental duplication and genome rearrangement. Moreover, gene expression profiles showed that different BrrCDPKs were expressed in specific tissues or stages. Transcript levels of BrrCDPKs indicated that they were involved in abiotic and biotic stresses and that paralogs exhibited functional divergence. Additionally, we identified 15 Rboh genes in turnip; the results of yeast two-hybrid analysis suggested that BrrRbohD1 interacted only with BrrCDPK10 and that BrrRbohD2 interacted with BrrCDPK4/7/9/10/17/22/23. Most of the genes play an important role in pst DC3000 defense by regulating the accumulation of H2O2 and stomatal closure. Our study may provide an important foundation for future functional analysis of BrrCDPKs and reveal further biological roles.
Subject Area植物学
WOS IDWOS:000415658600048
Language英语
Indexed BySCI
KeywordTriticum-aestivum L. Oxidative Burst Disease Resistance Salicylic-acid Abiotic Stress Nadph Oxidase Expression Analysis Signaling Pathways Stomatal Closure Plant Immunity
WOS Research AreaScience & Technology - Other Topics
WOS SubjectMultidisciplinary Sciences ; Science & Technology - Other Topics
Cooperation Status国内
Citation statistics
Cited Times:1[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.itpcas.ac.cn/handle/131C11/7943
Collection图书馆
Corresponding AuthorYang, YQ; Yang, YP
Affiliation1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming 650204, Yunnan, Peoples R China.
2.Chinese Acad Sci, Kunming Inst Bot, Plant Germplasm & Genom Ctr, Kunming 650201, Yunnan, Peoples R China.
3.Chinese Acad Sci, Kunming Inst Bot, Inst Tibetan Plateau Res Kunming, Kunming 650201, Yunnan, Peoples R China.
4.Yunnan Univ, Sch Life Sci, Kunming 650091, Yunnan, Peoples R China.
5.Univ Chinese Acad Sci, Beijing 100049, Peoples R China.
Recommended Citation
GB/T 7714
Wang, QL ,Yin, X ,Chen, Q ,et al. Genome-wide survey indicates diverse physiological roles of the turnip (Brassica rapa var. rapa) calcium-dependent protein kinase genes[J]. SCIENTIFIC REPORTS,2017,7(0):15803.
APA Wang, QL .,Yin, X .,Chen, Q .,Xiang, N .,Sun, XD .,...&Yang, YP.(2017).Genome-wide survey indicates diverse physiological roles of the turnip (Brassica rapa var. rapa) calcium-dependent protein kinase genes.SCIENTIFIC REPORTS,7(0),15803.
MLA Wang, QL ,et al."Genome-wide survey indicates diverse physiological roles of the turnip (Brassica rapa var. rapa) calcium-dependent protein kinase genes".SCIENTIFIC REPORTS 7.0(2017):15803.
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