| Pedobacter psychrotolerans sp nov., isolated from soil | |
| Manandhar, P (Manandhar, Pooja)1,2; Zhang, GX (Zhang, Gengxin)1; Lama, A (Lama, Arun)3; Hu, YL (Hu, Yilun)1,2; Gao, F (Gao, Feng)1,4; Zhang, GX | |
| Source Publication | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
 |
| 2016 | |
| Volume | 66Issue:0Pages:4560-4566 |
| DOI | 10.1099/ijsem.0.001391 |
| Abstract | A Gram-stain-negative, non-motile, light-pink-pigmented, aerobic, rod-shaped bacterium, designated V5RD(T), was isolated from soil of Damxung county in the Qinghai-Tibetan Plateau. Strain V5RD(T) grew luxuriously at 10 degrees C, at pH 9.0 and in the presence of 1 % NaCl (w/v). Phylogenetic analysis of 16S rRNA gene sequences placed strain V5RD(T) in the genus Pedobacter and found that it was most closely related to Pedobacter alluvionis DSM 19624(T) (97.3 %), Pedobacter ginsenosidimutans JCM 16721(T) (96.84 %), Pedobacter agri DSM 19486(T) (96.28 %), Pedobacter roseus JCM 13399(T) (96.22 %), Pedobacter sandarakinus KCTC 12559(T) (95.92 %) and Pedobacter borealis DSM 19626(T) (95.85 %). The G+C content of the genomic DNA of the type strain V5RD(T) was 37.40 mol%. DNA-DNA relatedness for the type strain V5RD(T) with respect to its closest phylogenetic relative, Pedobacter. alluvionis DSM 19624(T), was 62.5 +/- 1.7 %. The polar lipid profile of the strain consisted of phosphatidylethanolamine, one unidentified aminolipid, one unidentified glycolipid and two unidentified polar lipids. Menaquinone MK-7 was the predominant respiratory quinone, and summed feature 3 (comprising C-16 : 1 omega 7c and/or C-16 :1 omega 6c), iso-C-15 : 0 and iso-C-17 : 0 3-OH were the major fatty acids. With respect to phenotypic characteristics, biochemical properties and phylogenetic inference, strain V5RD(T) represents a novel species of the genus Pedobacter, for which the name Pedobacter psychrotolerans sp. nov is proposed. The type strain is V5RD(T) (=CGMCC 1.15644(T)=DSM 103236(T)). |
| Subject Area | 普通生物学 |
| WOS ID | WOS:000390686600039 |
| Language | 英语 |
| Indexed By | SCI |
| Keyword | Genus Pedobacter Emended Description Renaturation Rates Dna Hybridization Comb. Nov Water Reclassification Classification Heparinus Bacteria |
| Cooperation Status | 国内 |
| Department | 生态 |
| Subtype | Article |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.itpcas.ac.cn/handle/131C11/7502 |
| Collection | 图书馆 |
| Corresponding Author | Zhang, GX |
| Affiliation | 1.Chinese Acad Sci, Inst Tibetan Plateau Res, Key Lab Alpine Ecol & Biodivers, Beijing, Peoples R China 2.Univ Chinese Acad Sci, Beijing, Peoples R China 3.Tsinghua Univ, Sch Environm, Beijing, Peoples R China 4.Hebei Univ Engn, Handan, Peoples R China |
| Recommended Citation GB/T 7714 | Manandhar, P ,Zhang, GX ,Lama, A ,et al. Pedobacter psychrotolerans sp nov., isolated from soil[J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,2016,66(0):4560-4566. |
| APA | Manandhar, P ,Zhang, GX ,Lama, A ,Hu, YL ,Gao, F ,&Zhang, GX.(2016).Pedobacter psychrotolerans sp nov., isolated from soil.INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,66(0),4560-4566. |
| MLA | Manandhar, P ,et al."Pedobacter psychrotolerans sp nov., isolated from soil".INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 66.0(2016):4560-4566. |
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| File Name/Size | DocType | Version | Access | License | ||
| V.66 4560-4566 2016.（180KB） | 期刊论文 | 作者接受稿 | 开放获取 | CC BY-NC-SA | View Application Full Text | |
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